J3_7D6Z_005

3D structure

PDB id

7D6Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factor

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGAU*AUUUAAAG*CAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7D6Z|1|A|G|1055
7D6Z|1|A|G|1056
7D6Z|1|A|A|1057
7D6Z|1|A|U|1058
*
7D6Z|1|A|A|1080
7D6Z|1|A|U|1081
7D6Z|1|A|U|1082
7D6Z|1|A|U|1083
7D6Z|1|A|A|1084
7D6Z|1|A|A|1085
7D6Z|1|A|A|1086
7D6Z|1|A|G|1087
*
7D6Z|1|A|C|1102
7D6Z|1|A|A|1103
7D6Z|1|A|C|1104

Current chains

Chain A

23S ribosomal rRNA

Nearby chains

Chain I

50S ribosomal protein L11

Chain e

50S ribosomal protein L36