J3_7F5S_021

3D structure

PDB id

7F5S (explore in PDB, NAKB, or RNA 3D Hub)

Description

human delta-METTL18 60S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

CAGUC*GUGCG*CGACG

Length

15 nucleotides

Bulged bases

7F5S|1|L5|C|704, 7F5S|1|L5|C|1295

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7F5S|1|L5|C|451
7F5S|1|L5|A|452
7F5S|1|L5|G|453
7F5S|1|L5|U|454
7F5S|1|L5|C|455
*
7F5S|1|L5|G|701
7F5S|1|L5|U|702
7F5S|1|L5|G|703
7F5S|1|L5|C|704
7F5S|1|L5|G|705
*
7F5S|1|L5|C|1292
7F5S|1|L5|G|1293
7F5S|1|L5|A|1294
7F5S|1|L5|C|1295
7F5S|1|L5|G|1296

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain Le

60S ribosomal protein L32

Chain Lf

60S ribosomal protein L35a