J3_7JQL_016
3D structure
- PDB id
- 7JQL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGG*CUAG*CG
- Length
- 9 nucleotides
- Bulged bases
- 7JQL|1|1a|A|653
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7JQL_016 not in the Motif Atlas
- Homologous match to J3_6CZR_016
- Geometric discrepancy: 0.1513
- The information below is about J3_6CZR_016
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_56052.4
- Basepair signature
- cWW-F-cWW-cWW-F
- Number of instances in this motif group
- 6
Unit IDs
7JQL|1|1a|C|586
7JQL|1|1a|G|587
7JQL|1|1a|G|588
*
7JQL|1|1a|C|651
7JQL|1|1a|U|652
7JQL|1|1a|A|653
7JQL|1|1a|G|654
*
7JQL|1|1a|C|754
7JQL|1|1a|G|755
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1h
- 30S ribosomal protein S8
- Chain 1l
- 30S ribosomal protein S12
- Chain 1o
- 30S ribosomal protein S15
- Chain 1q
- 30S ribosomal protein S17
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