J3_7JQM_037

3D structure

PDB id

7JQM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-002, mRNA, and deacylated P-site tRNA at 3.05A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

CUCAG*CGGAGAGC*GUAGAAG

Length

20 nucleotides

Bulged bases

7JQM|1|2A|G|2334

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7JQM|1|2A|C|2295
7JQM|1|2A|U|2296
7JQM|1|2A|C|2297
7JQM|1|2A|A|2298
7JQM|1|2A|G|2299
*
7JQM|1|2A|C|2317
7JQM|1|2A|G|2318
7JQM|1|2A|G|2319
7JQM|1|2A|A|2320
7JQM|1|2A|G|2321
7JQM|1|2A|A|2322
7JQM|1|2A|G|2323
7JQM|1|2A|C|2324
*
7JQM|1|2A|G|2331
7JQM|1|2A|U|2332
7JQM|1|2A|A|2333
7JQM|1|2A|G|2334
7JQM|1|2A|A|2335
7JQM|1|2A|A|2336
7JQM|1|2A|G|2337

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 20

50S ribosomal protein L27

Chain 2B

5S ribosomal RNA; 5S rRNA

Chain 2G

50S ribosomal protein L5

Chain 2S

50S ribosomal protein L18

Chain 2x

Transfer RNA; tRNA