J3_7JT1_010

3D structure

PDB id

7JT1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUAAU*AGGUUAG*CAUAAG

Length

18 nucleotides

Bulged bases

7JT1|1|1|U|2334

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7JT1|1|1|C|2295
7JT1|1|1|U|2296
7JT1|1|1|A|2297
7JT1|1|1|A|2298
7JT1|1|1|U|2299
*
7JT1|1|1|A|2317
7JT1|1|1|G|2318
7JT1|1|1|G|2319
7JT1|1|1|U|2320
7JT1|1|1|U|2321
7JT1|1|1|A|2322
7JT1|1|1|G|2323
*
7JT1|1|1|C|2332
7JT1|1|1|A|2333
7JT1|1|1|U|2334
7JT1|1|1|A|2335
7JT1|1|1|A|2336
7JT1|1|1|G|2337

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 2

5S ribosomal RNA; 5S rRNA

Chain e

50S ribosomal protein L5

Chain o

50S ribosomal protein L18

Chain w

50S ribosomal protein L27