J3_7K00_008

3D structure

PDB id

7K00 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome at 2 Angstrom Resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

1.98 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7K00_008 not in the Motif Atlas

Homologous match to J3_5J7L_007

Geometric discrepancy: 0.1155

The information below is about J3_5J7L_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_82572.1

Basepair signature

cWW-tSH-tWW-F-cWW-tHW-F-F-cWW

Number of instances in this motif group

2

Unit IDs

7K00|1|A|C|990
7K00|1|A|U|991
7K00|1|A|U|992
7K00|1|A|G|993
*
7K00|1|A|C|1045
7K00|1|A|A|1046
7K00|1|A|G|1047
*
7K00|1|A|C|1210
7K00|1|A|U|1211
7K00|1|A|U|1212
7K00|1|A|A|1213
7K00|1|A|C|1214
7K00|1|A|G|1215

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

30S ribosomal protein S14