J3_7K54_010

3D structure

PDB id

7K54 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUAAU*AGGUUAG*CAUAAG

Length

18 nucleotides

Bulged bases

7K54|1|1|U|2334, 7K54|1|1|A|2336

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7K54|1|1|C|2295
7K54|1|1|U|2296
7K54|1|1|A|2297
7K54|1|1|A|2298
7K54|1|1|U|2299
*
7K54|1|1|A|2317
7K54|1|1|G|2318
7K54|1|1|G|2319
7K54|1|1|U|2320
7K54|1|1|U|2321
7K54|1|1|A|2322
7K54|1|1|G|2323
*
7K54|1|1|C|2332
7K54|1|1|A|2333
7K54|1|1|U|2334
7K54|1|1|A|2335
7K54|1|1|A|2336
7K54|1|1|G|2337

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 2

5S ribosomal RNA; 5S rRNA

Chain 5

Transfer RNA; tRNA

Chain e

50S ribosomal protein L5

Chain o

50S ribosomal protein L18

Chain w

50S ribosomal protein L27