3D structure

PDB id
7K54 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CUUAU*AGAC*GGUGGG
Length
15 nucleotides
Bulged bases
7K54|1|3|U|1183
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7K54|1|3|C|1114
7K54|1|3|U|1115
7K54|1|3|U|1116
7K54|1|3|A|1117
7K54|1|3|U|1118
*
7K54|1|3|A|1155
7K54|1|3|G|1156
7K54|1|3|A|1157
7K54|1|3|C|1158
*
7K54|1|3|G|1181
7K54|1|3|G|1182
7K54|1|3|U|1183
7K54|1|3|G|1184
7K54|1|3|G|1185
7K54|1|3|G|1186

Current chains

Chain 3
16S ribosomal RNA

Nearby chains

Chain G
30S ribosomal protein S2
Chain H
30S ribosomal protein S3
Chain L
30S ribosomal protein S7
Chain N
30S ribosomal protein S9
Chain O
30S ribosomal protein S10
Chain S
30S ribosomal protein S14

Coloring options:

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