J3_7L20_002

3D structure

PDB id

7L20 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 39S mitoribosomal subunit in complex with RRFmt and EF-G2mt.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.15 Å

Loop

Sequence

CAG*CACAC*GAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7L20_002 not in the Motif Atlas

Homologous match to J3_7RQB_005

Geometric discrepancy: 0.1466

The information below is about J3_7RQB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_44724.4

Basepair signature

cWW-tSH-F-cWW-tHS-cWW-F

Number of instances in this motif group

6

Unit IDs

7L20|1|A|C|1930
7L20|1|A|A|1931
7L20|1|A|G|1932
*
7L20|1|A|C|1942
7L20|1|A|A|1943
7L20|1|A|C|1944
7L20|1|A|A|1945
7L20|1|A|C|1946
*
7L20|1|A|G|1970
7L20|1|A|A|1971
7L20|1|A|A|1972
7L20|1|A|G|1973

Current chains

Chain A

16S rRNA mitochondrial

Nearby chains

Chain 5

39S ribosomal protein L37, mitochondrial

Chain D

39S ribosomal protein L2, mitochondrial