J3_7LH5_020

3D structure

PDB id

7LH5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

3.27 Å

Loop

Sequence

GGAC*GC*GGGAAGCCCGCAACCC

Length

22 nucleotides

Bulged bases

7LH5|1|BA|A|1445, 7LH5|1|BA|C|1531, 7LH5|1|BA|C|1543

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LH5|1|BA|G|1443
7LH5|1|BA|G|1444
7LH5|1|BA|A|1445
7LH5|1|BA|C|1445|||A
*
7LH5|1|BA|G|1466
7LH5|1|BA|C|1467
*
7LH5|1|BA|G|1525
7LH5|1|BA|G|1526
7LH5|1|BA|G|1527
7LH5|1|BA|A|1528
7LH5|1|BA|A|1528|||A
7LH5|1|BA|G|1529
7LH5|1|BA|C|1530
7LH5|1|BA|C|1531
7LH5|1|BA|C|1532
7LH5|1|BA|G|1533
7LH5|1|BA|C|1543
7LH5|1|BA|A|1544
7LH5|1|BA|A|1545
7LH5|1|BA|C|1546
7LH5|1|BA|C|1547
7LH5|1|BA|C|1548

Current chains

Chain BA

23S ribosomal RNA

Nearby chains