J3_7LS1_012
3D structure
- PDB id
- 7LS1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GG*CGCUUCUGGCGCCAAG*CGAC
- Length
- 22 nucleotides
- Bulged bases
- 7LS1|1|A2|G|3765, 7LS1|1|A2|C|3766, 7LS1|1|A2|U|3767, 7LS1|1|A2|U|3768, 7LS1|1|A2|C|3769, 7LS1|1|A2|U|3770, 7LS1|1|A2|G|3771, 7LS1|1|A2|G|3774
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7LS1|1|A2|G|3742
7LS1|1|A2|G|3743
*
7LS1|1|A2|C|3764
7LS1|1|A2|G|3765
7LS1|1|A2|C|3766
7LS1|1|A2|U|3767
7LS1|1|A2|U|3768
7LS1|1|A2|C|3769
7LS1|1|A2|U|3770
7LS1|1|A2|G|3771
7LS1|1|A2|G|3772
7LS1|1|A2|C|3773
7LS1|1|A2|G|3774
7LS1|1|A2|C|3775
7LS1|1|A2|C|3776
7LS1|1|A2|A|3777
7LS1|1|A2|A|3778
7LS1|1|A2|G|3779
*
7LS1|1|A2|C|3807
7LS1|1|A2|G|3808
7LS1|1|A2|A|3809
7LS1|1|A2|C|3810
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain B1
- 60S ribosomal protein L7a
- Chain D2
- 60S ribosomal protein L8
- Chain R2
- 60S ribosomal protein L23a
- Chain T2
- 60S ribosomal protein L27
- Chain W2
- 60S ribosomal protein L30
- Chain a2
- 60S ribosomal protein L34
- Chain j2
- 60S ribosomal protein L37a
Coloring options: