J3_7LS1_022
3D structure
- PDB id
- 7LS1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CUG*UUCCGG*CAAAG
- Length
- 14 nucleotides
- Bulged bases
- 7LS1|1|m2|C|1140
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7LS1|1|m2|C|1096
7LS1|1|m2|U|1097
7LS1|1|m2|G|1098
*
7LS1|1|m2|U|1138
7LS1|1|m2|U|1139
7LS1|1|m2|C|1140
7LS1|1|m2|C|1141
7LS1|1|m2|G|1142
7LS1|1|m2|G|1143
*
7LS1|1|m2|C|1149
7LS1|1|m2|A|1150
7LS1|1|m2|A|1151
7LS1|1|m2|A|1152
7LS1|1|m2|G|1153
Current chains
- Chain m2
- 28S rRNA
Nearby chains
- Chain D3
- 40S ribosomal protein S21
- Chain F3
- 40S ribosomal protein S26
- Chain J3
- 40S ribosomal protein S2
- Chain P3
- 40S ribosomal protein S15a
- Chain S3
- 40S ribosomal protein S27-like
- Chain o2
- 40S ribosomal protein SA
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