J3_7LS1_029
3D structure
- PDB id
- 7LS1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CUGGC*GGACAAG*CCCGAGAUUG
- Length
- 22 nucleotides
- Bulged bases
- 7LS1|1|m2|U|1479
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7LS1|1|m2|C|1393
7LS1|1|m2|U|1394
7LS1|1|m2|G|1395
7LS1|1|m2|G|1396
7LS1|1|m2|C|1397
*
7LS1|1|m2|G|1452
7LS1|1|m2|G|1453
7LS1|1|m2|A|1454
7LS1|1|m2|C|1455
7LS1|1|m2|A|1456
7LS1|1|m2|A|1457
7LS1|1|m2|G|1458
*
7LS1|1|m2|C|1472
7LS1|1|m2|C|1473
7LS1|1|m2|C|1474
7LS1|1|m2|G|1475
7LS1|1|m2|A|1476
7LS1|1|m2|G|1477
7LS1|1|m2|A|1478
7LS1|1|m2|U|1479
7LS1|1|m2|U|1480
7LS1|1|m2|G|1481
Current chains
- Chain m2
- 28S rRNA
Nearby chains
- Chain C3
- 40S ribosomal protein S20
- Chain G3
- 40S ribosomal protein S28
- Chain H3
- 40S ribosomal protein S29
- Chain I3
- Receptor of activated protein C kinase 1
- Chain q2
- 40S ribosomal protein S3
- Chain s2
- 40S ribosomal protein S5
- Chain y2
- 40S ribosomal protein S16
- Chain z2
- 40S ribosomal protein S17
Coloring options: