J3_7LS1_043
3D structure
- PDB id
- 7LS1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- ACCACCAG*CCAGUAA*UGAUUAAGUCCCU
- Length
- 28 nucleotides
- Bulged bases
- 7LS1|1|m2|C|1218
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7LS1|1|m2|A|1216
7LS1|1|m2|C|1217
7LS1|1|m2|C|1218
7LS1|1|m2|A|1219
7LS1|1|m2|C|1220
7LS1|1|m2|C|1221
7LS1|1|m2|A|1222
7LS1|1|m2|G|1223
*
7LS1|1|m2|C|1647
7LS1|1|m2|C|1648
7LS1|1|m2|A|1649
7LS1|1|m2|G|1650
7LS1|1|m2|U|1651
7LS1|1|m2|A|1652
7LS1|1|m2|A|1653
*
7LS1|1|m2|U|1675
7LS1|1|m2|G|1676
7LS1|1|m2|A|1677
7LS1|1|m2|U|1678
7LS1|1|m2|U|1679
7LS1|1|m2|A|1680
7LS1|1|m2|A|1681
7LS1|1|m2|G|1682
7LS1|1|m2|U|1683
7LS1|1|m2|C|1684
7LS1|1|m2|C|1685
7LS1|1|m2|C|1686
7LS1|1|m2|U|1687
Current chains
- Chain m2
- 28S rRNA
Nearby chains
- Chain C3
- 40S ribosomal protein S20
- Chain F3
- 40S ribosomal protein S26
- Chain G3
- 40S ribosomal protein S28
- Chain n2
- Transfer RNA; tRNA
- Chain s2
- 40S ribosomal protein S5
- Chain y2
- 40S ribosomal protein S16
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