J3_7LV0_003

3D structure

PDB id

7LV0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGAUCUA*UGG*CAAA

Length

14 nucleotides

Bulged bases

7LV0|1|1|U|686, 7LV0|1|1|A|792

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7LV0_003 not in the Motif Atlas

Homologous match to J3_5J7L_038

Geometric discrepancy: 0.1116

The information below is about J3_5J7L_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_64189.2

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

7

Unit IDs

7LV0|1|1|U|683
7LV0|1|1|G|684
7LV0|1|1|A|685
7LV0|1|1|U|686
7LV0|1|1|C|687
7LV0|1|1|U|688
7LV0|1|1|A|689
*
7LV0|1|1|U|773
7LV0|1|1|G|774
7LV0|1|1|G|775
*
7LV0|1|1|C|791
7LV0|1|1|A|792
7LV0|1|1|A|793
7LV0|1|1|A|794

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L34

Chain b

50S ribosomal protein L2

Chain d

50S ribosomal protein L4