J3_7LV0_028

3D structure

PDB id

7LV0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGAAG*CGCGAUACAG*CGUAC

Length

20 nucleotides

Bulged bases

7LV0|1|1|U|321

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7LV0_028 not in the Motif Atlas

Homologous match to J3_5J7L_068

Geometric discrepancy: 0.0961

The information below is about J3_5J7L_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46299.2

Basepair signature

cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7LV0|1|1|G|297
7LV0|1|1|G|298
7LV0|1|1|A|299
7LV0|1|1|A|300
7LV0|1|1|G|301
*
7LV0|1|1|C|316
7LV0|1|1|G|317
7LV0|1|1|C|318
7LV0|1|1|G|319
7LV0|1|1|A|320
7LV0|1|1|U|321
7LV0|1|1|A|322
7LV0|1|1|C|323
7LV0|1|1|A|324
7LV0|1|1|G|325
*
7LV0|1|1|C|337
7LV0|1|1|G|338
7LV0|1|1|U|339
7LV0|1|1|A|340
7LV0|1|1|C|341

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain d

50S ribosomal protein L4

Chain u

50S ribosomal protein L24