J3_7LVA_007

3D structure

PDB id

7LVA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Solution structure of the HIV-1 PBS-segment

Experimental method

SOLUTION NMR

Resolution

Loop

Sequence

UAAC*GCA*UAAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LVA|4|A|U|131
7LVA|4|A|A|132
7LVA|4|A|A|133
7LVA|4|A|C|134
*
7LVA|4|A|G|178
7LVA|4|A|C|179
7LVA|4|A|A|180
*
7LVA|4|A|U|213
7LVA|4|A|A|214
7LVA|4|A|A|215
7LVA|4|A|A|216
7LVA|4|A|G|217

Current chains

Chain A

RNA (103-MER)

Nearby chains