J3_7M5D_005

3D structure

PDB id

7M5D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGA*UUUAAAGAAA*UCAC

Length

17 nucleotides

Bulged bases

7M5D|1|1|A|1084, 7M5D|1|1|A|1088

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7M5D|1|1|G|1055
7M5D|1|1|G|1056
7M5D|1|1|A|1057
*
7M5D|1|1|U|1081
7M5D|1|1|U|1082
7M5D|1|1|U|1083
7M5D|1|1|A|1084
7M5D|1|1|A|1085
7M5D|1|1|A|1086
7M5D|1|1|G|1087
7M5D|1|1|A|1088
7M5D|1|1|A|1089
7M5D|1|1|A|1090
*
7M5D|1|1|U|1101
7M5D|1|1|C|1102
7M5D|1|1|A|1103
7M5D|1|1|C|1104

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain H

50S ribosomal protein L10

Chain I

50S ribosomal protein L11

Chain f

50S ribosomal protein L36