J3_7M5D_012
3D structure
- PDB id
- 7M5D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CUG*CC*GAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7M5D_012 not in the Motif Atlas
- Homologous match to J3_5J7L_047
- Geometric discrepancy: 0.1577
- The information below is about J3_5J7L_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_30104.1
- Basepair signature
- cWW-F-F-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
7M5D|1|1|C|2789
7M5D|1|1|U|2790
7M5D|1|1|G|2791
*
7M5D|1|1|C|2805
7M5D|1|1|C|2806
*
7M5D|1|1|G|2892
7M5D|1|1|A|2893
7M5D|1|1|G|2894
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L3
Coloring options: