J3_7MPJ_035
3D structure
- PDB id
- 7MPJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stm1 bound vacant 80S structure isolated from nop1-D243A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- AGAUGG*CGUUUCAAAGG*CACCAU
- Length
- 23 nucleotides
- Bulged bases
- 7MPJ|1|A1|C|1556, 7MPJ|1|A1|A|1558
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7MPJ|1|A1|A|1537
7MPJ|1|A1|G|1538
7MPJ|1|A1|A|1539
7MPJ|1|A1|U|1540
7MPJ|1|A1|G|1541
7MPJ|1|A1|G|1542
*
7MPJ|1|A1|C|1551
7MPJ|1|A1|G|1552
7MPJ|1|A1|U|1553
7MPJ|1|A1|U|1554
7MPJ|1|A1|U|1555
7MPJ|1|A1|C|1556
7MPJ|1|A1|A|1557
7MPJ|1|A1|A|1558
7MPJ|1|A1|A|1559
7MPJ|1|A1|G|1560
7MPJ|1|A1|G|1561
*
7MPJ|1|A1|C|1579
7MPJ|1|A1|A|1580
7MPJ|1|A1|C|1581
7MPJ|1|A1|C|1582
7MPJ|1|A1|A|1583
7MPJ|1|A1|U|1584
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain A4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AA
- 60S ribosomal protein L2-A
- Chain AG
- 60S ribosomal protein L8-A
- Chain AN
- 60S ribosomal protein L15-A
- Chain AX
- 60S ribosomal protein L25
- Chain Aj
- 60S ribosomal protein L37-A
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