J3_7MQA_002
3D structure
- PDB id
- 7MQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human SSU processome, state post-A1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CAGAUCA*UUG*C(PSU)AG
- Length
- 14 nucleotides
- Bulged bases
- 7MQA|1|L1|U|227
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7MQA|1|L1|C|223
7MQA|1|L1|A|224
7MQA|1|L1|G|225
7MQA|1|L1|A|226
7MQA|1|L1|U|227
7MQA|1|L1|C|228
7MQA|1|L1|A|229
*
7MQA|1|L1|U|286
7MQA|1|L1|U|287
7MQA|1|L1|G|288
*
7MQA|1|L1|C|295
7MQA|1|L1|PSU|296
7MQA|1|L1|A|297
7MQA|1|L1|G|298
Current chains
- Chain L1
- 18S rRNA
Nearby chains
- Chain L4
- 40S ribosomal protein S4, X isoform
- Chain L6
- 40S ribosomal protein S6
- Chain L8
- 40S ribosomal protein S8
- Chain LD
- 40S ribosomal protein S11
- Chain SP
- Small subunit processome component 20 homolog
Coloring options: