J3_7MQA_008

3D structure

PDB id

7MQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human SSU processome, state post-A1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UCG*CGAGAC*GCAAUA

Length

15 nucleotides

Bulged bases

7MQA|1|L1|A|1484

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MQA|1|L1|U|1340
7MQA|1|L1|C|1341
7MQA|1|L1|G|1345
*
7MQA|1|L1|C|1384
7MQA|1|L1|G|1385
7MQA|1|L1|A|1386
7MQA|1|L1|G|1387
7MQA|1|L1|A|1388
7MQA|1|L1|C|1389
*
7MQA|1|L1|G|1481
7MQA|1|L1|C|1482
7MQA|1|L1|A|1483
7MQA|1|L1|A|1484
7MQA|1|L1|U|1485
7MQA|1|L1|A|1486

Current chains

Chain L1

18S rRNA

Nearby chains

Chain NR

RRP12-like protein

Chain NU

40S ribosomal protein S17