J3_7MQA_010

3D structure

PDB id

7MQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human SSU processome, state post-A1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUGGC*GGACAAG*CCCGAGAUUG

Length

22 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MQA|1|L1|C|1391
7MQA|1|L1|U|1392
7MQA|1|L1|G|1393
7MQA|1|L1|G|1394
7MQA|1|L1|C|1395
*
7MQA|1|L1|G|1450
7MQA|1|L1|G|1451
7MQA|1|L1|A|1452
7MQA|1|L1|C|1453
7MQA|1|L1|A|1454
7MQA|1|L1|A|1455
7MQA|1|L1|G|1456
*
7MQA|1|L1|C|1470
7MQA|1|L1|C|1471
7MQA|1|L1|C|1472
7MQA|1|L1|G|1473
7MQA|1|L1|A|1474
7MQA|1|L1|G|1475
7MQA|1|L1|A|1476
7MQA|1|L1|U|1477
7MQA|1|L1|U|1478
7MQA|1|L1|G|1479

Current chains

Chain L1

18S rRNA

Nearby chains

Chain NR

RRP12-like protein

Chain NU

40S ribosomal protein S17