3D structure

PDB id
7MSC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mtb 70SIC in complex with MtbEttA at Pre_R0 state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.97 Å

Loop

Sequence
UGU*AGAC*GGUG
Length
11 nucleotides
Bulged bases
7MSC|1|a|U|1175
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7MSC_026 not in the Motif Atlas
Homologous match to J3_5J7L_010
Geometric discrepancy: 0.1487
The information below is about J3_5J7L_010
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_82365.4
Basepair signature
cWW-F-cWW-cWW-F-F
Number of instances in this motif group
4

Unit IDs

7MSC|1|a|U|1107
7MSC|1|a|G|1108
7MSC|1|a|U|1109
*
7MSC|1|a|A|1147
7MSC|1|a|G|1148
7MSC|1|a|A|1149
7MSC|1|a|C|1150
*
7MSC|1|a|G|1173
7MSC|1|a|G|1174
7MSC|1|a|U|1175
7MSC|1|a|G|1176

Current chains

Chain a
16S rRNA

Nearby chains

Chain i
30S ribosomal protein S9
Chain j
30S ribosomal protein S10
Chain n
30S ribosomal protein S14 type Z

Coloring options:


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