J3_7MSH_032
3D structure
- PDB id
- 7MSH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mtb 70SIC in complex with MtbEttA at Pre_R1 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- GCC*GAUUAGUGAUCC*GCUCAAC
- Length
- 22 nucleotides
- Bulged bases
- 7MSH|1|A|A|2626, 7MSH|1|A|U|2628, 7MSH|1|A|A|2664
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7MSH_032 not in the Motif Atlas
- Homologous match to J3_5J7L_070
- Geometric discrepancy: 0.132
- The information below is about J3_5J7L_070
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_20992.1
- Basepair signature
- cWW-F-F-cWW-tHW-tHW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7MSH|1|A|G|2520
7MSH|1|A|C|2521
7MSH|1|A|C|2522
*
7MSH|1|A|G|2622
7MSH|1|A|A|2623
7MSH|1|A|U|2624
7MSH|1|A|U|2625
7MSH|1|A|A|2626
7MSH|1|A|G|2627
7MSH|1|A|U|2628
7MSH|1|A|G|2629
7MSH|1|A|A|2630
7MSH|1|A|U|2631
7MSH|1|A|C|2632
7MSH|1|A|C|2633
*
7MSH|1|A|G|2659
7MSH|1|A|C|2660
7MSH|1|A|U|2661
7MSH|1|A|C|2662
7MSH|1|A|A|2663
7MSH|1|A|A|2664
7MSH|1|A|C|2665
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L33 2
- Chain 3
- 50S ribosomal protein L35
- Chain L
- 50S ribosomal protein L15
- Chain W
- 50S ribosomal protein L27
- Chain x
- Energy-dependent translational throttle protein EttA
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