J3_7MT2_008

3D structure

PDB id

7MT2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

CAAG*CCCAAAC*GUG

Length

14 nucleotides

Bulged bases

7MT2|1|A|A|1844

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7MT2_008 not in the Motif Atlas

Homologous match to J3_7RQB_008

Geometric discrepancy: 0.1438

The information below is about J3_7RQB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_16623.1

Basepair signature

cWW-tSH-tWW-tHH-F-tHW-cWW-F-cWW

Number of instances in this motif group

2

Unit IDs

7MT2|1|A|C|1437
7MT2|1|A|A|1438
7MT2|1|A|A|1439
7MT2|1|A|G|1440
*
7MT2|1|A|C|1840
7MT2|1|A|C|1841
7MT2|1|A|C|1842
7MT2|1|A|A|1843
7MT2|1|A|A|1844
7MT2|1|A|A|1845
7MT2|1|A|C|1846
*
7MT2|1|A|G|1855
7MT2|1|A|U|1856
7MT2|1|A|G|1857

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34