J3_7MT3_005

3D structure

PDB id

7MT3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70S with P/E tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CAG*CGAAC*GAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7MT3_005 not in the Motif Atlas

Homologous match to J3_7RQB_005

Geometric discrepancy: 0.073

The information below is about J3_7RQB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_44724.4

Basepair signature

cWW-tSH-F-cWW-tHS-cWW-F

Number of instances in this motif group

6

Unit IDs

7MT3|1|A|C|827
7MT3|1|A|A|828
7MT3|1|A|G|829
*
7MT3|1|A|C|861
7MT3|1|A|G|862
7MT3|1|A|A|863
7MT3|1|A|A|864
7MT3|1|A|C|865
*
7MT3|1|A|G|889
7MT3|1|A|A|890
7MT3|1|A|U|891
7MT3|1|A|G|892

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2