3D structure

PDB id
7N1P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
2.33 Å

Loop

Sequence
UGAUCUA*UGG*CAAA
Length
14 nucleotides
Bulged bases
7N1P|1|23|U|686, 7N1P|1|23|A|792
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7N1P_016 not in the Motif Atlas
Homologous match to J3_5J7L_038
Geometric discrepancy: 0.0481
The information below is about J3_5J7L_038
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_64189.2
Basepair signature
cWW-tWH-cWW-tSW-F-F-cWW
Number of instances in this motif group
7

Unit IDs

7N1P|1|23|U|683
7N1P|1|23|G|684
7N1P|1|23|A|685
7N1P|1|23|U|686
7N1P|1|23|C|687
7N1P|1|23|U|688
7N1P|1|23|A|689
*
7N1P|1|23|U|773
7N1P|1|23|G|774
7N1P|1|23|G|775
*
7N1P|1|23|C|791
7N1P|1|23|A|792
7N1P|1|23|A|793
7N1P|1|23|A|794

Current chains

Chain 23
23S rRNA

Nearby chains

Chain LB
50S ribosomal protein L2
Chain Lh
50S ribosomal protein L34

Coloring options:


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