J3_7N1P_017

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CAG*CGAAC*GAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7N1P_017 not in the Motif Atlas

Homologous match to J3_5J7L_039

Geometric discrepancy: 0.0538

The information below is about J3_5J7L_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_44724.7

Basepair signature

cWW-tHS-F-cWW-tHS-cWW-F

Number of instances in this motif group

6

Unit IDs

7N1P|1|23|C|698
7N1P|1|23|A|699
7N1P|1|23|G|700
*
7N1P|1|23|C|732
7N1P|1|23|G|733
7N1P|1|23|A|734
7N1P|1|23|A|735
7N1P|1|23|C|736
*
7N1P|1|23|G|760
7N1P|1|23|A|761
7N1P|1|23|U|762
7N1P|1|23|G|763

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LB

50S ribosomal protein L2