J3_7N1P_024

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CAUC*GUA*UUUAAAG

Length

14 nucleotides

Bulged bases

7N1P|1|23|A|2518

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7N1P_024 not in the Motif Atlas

Homologous match to J3_5J7L_046

Geometric discrepancy: 0.051

The information below is about J3_5J7L_046

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32601.5

Basepair signature

cWW-tWH-cHW-F-cWW-tSS-F-cWW

Number of instances in this motif group

4

Unit IDs

7N1P|1|23|C|2517
7N1P|1|23|A|2518
7N1P|1|23|U|2519
7N1P|1|23|C|2520
*
7N1P|1|23|G|2545
7N1P|1|23|U|2546
7N1P|1|23|A|2547
*
7N1P|1|23|U|2561
7N1P|1|23|U|2562
7N1P|1|23|U|2563
7N1P|1|23|A|2564
7N1P|1|23|A|2565
7N1P|1|23|A|2566
7N1P|1|23|G|2567

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LC

50S ribosomal protein L3

Chain LN

50S ribosomal protein L14