J3_7N1P_030

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

7N1P|1|16|U|1212, 7N1P|1|16|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7N1P_030 not in the Motif Atlas

Homologous match to J3_5J7L_053

Geometric discrepancy: 0.0939

The information below is about J3_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

7N1P|1|16|C|990
7N1P|1|16|U|991
7N1P|1|16|U|992
7N1P|1|16|G|993
7N1P|1|16|A|994
7N1P|1|16|C|995
7N1P|1|16|A|996
7N1P|1|16|U|997
*
7N1P|1|16|A|1044
7N1P|1|16|C|1045
7N1P|1|16|A|1046
7N1P|1|16|G|1047
*
7N1P|1|16|C|1210
7N1P|1|16|U|1211
7N1P|1|16|U|1212
7N1P|1|16|A|1213
7N1P|1|16|C|1214
7N1P|1|16|G|1215

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SN

30S ribosomal protein S14