J3_7N2U_005

3D structure

PDB id

7N2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

CAAG*CUAGUAA*UGAAUACG

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7N2U_005 not in the Motif Atlas

Homologous match to J3_4LFB_002

Geometric discrepancy: 0.0677

The information below is about J3_4LFB_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_85722.1

Basepair signature

cWW-F-F-cSS-F-cWW-tHH-tWW-F-tWH-tHS-cSH-cWW

Number of instances in this motif group

5

Unit IDs

7N2U|1|16|C|936
7N2U|1|16|A|937
7N2U|1|16|A|938
7N2U|1|16|G|939
*
7N2U|1|16|C|1344
7N2U|1|16|U|1345
7N2U|1|16|A|1346
7N2U|1|16|G|1347
7N2U|1|16|U|1348
7N2U|1|16|A|1349
7N2U|1|16|A|1350
*
7N2U|1|16|U|1372
7N2U|1|16|G|1373
7N2U|1|16|A|1374
7N2U|1|16|A|1375
7N2U|1|16|U|1376
7N2U|1|16|A|1377
7N2U|1|16|C|1378
7N2U|1|16|G|1379

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SG

30S ribosomal protein S7

Chain SI

30S ribosomal protein S9