J3_7N30_035

3D structure

PDB id

7N30 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

GGAAG*CGCGAUACAG*CGUAC

Length

20 nucleotides

Bulged bases

7N30|1|23|U|321

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7N30_035 not in the Motif Atlas

Homologous match to J3_5J7L_068

Geometric discrepancy: 0.0436

The information below is about J3_5J7L_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46299.2

Basepair signature

cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7N30|1|23|G|297
7N30|1|23|G|298
7N30|1|23|A|299
7N30|1|23|A|300
7N30|1|23|G|301
*
7N30|1|23|C|316
7N30|1|23|G|317
7N30|1|23|C|318
7N30|1|23|G|319
7N30|1|23|A|320
7N30|1|23|U|321
7N30|1|23|A|322
7N30|1|23|C|323
7N30|1|23|A|324
7N30|1|23|G|325
*
7N30|1|23|C|337
7N30|1|23|G|338
7N30|1|23|U|339
7N30|1|23|A|340
7N30|1|23|C|341

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LD

50S ribosomal protein L4

Chain LX

50S ribosomal protein L24