J3_7NAT_017

3D structure

PDB id

7NAT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state A (Consensus refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

7NAT|1|A|C|1214

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7NAT_017 not in the Motif Atlas

Homologous match to J3_5J7L_053

Geometric discrepancy: 0.1286

The information below is about J3_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

7NAT|1|A|C|990
7NAT|1|A|U|991
7NAT|1|A|U|992
7NAT|1|A|G|993
7NAT|1|A|A|994
7NAT|1|A|C|995
7NAT|1|A|A|996
7NAT|1|A|U|997
*
7NAT|1|A|A|1044
7NAT|1|A|C|1045
7NAT|1|A|A|1046
7NAT|1|A|G|1047
*
7NAT|1|A|C|1210
7NAT|1|A|U|1211
7NAT|1|A|U|1212
7NAT|1|A|A|1213
7NAT|1|A|C|1214
7NAT|1|A|G|1215

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

30S ribosomal protein S14