J3_7NBU_009

3D structure

PDB id

7NBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955) and its target, the cspA mRNA, on the E. coli Ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

GAAC*GGUGCC*GGAAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NBU|1|A|G|1003
7NBU|1|A|A|1004
7NBU|1|A|A|1005
7NBU|1|A|C|1006
*
7NBU|1|A|G|1023
7NBU|1|A|G|1024
7NBU|1|A|U|1025
7NBU|1|A|G|1026
7NBU|1|A|C|1027
7NBU|1|A|C|1028
*
7NBU|1|A|G|1033
7NBU|1|A|G|1034
7NBU|1|A|A|1035
7NBU|1|A|A|1036
7NBU|1|A|C|1037

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain N

30S ribosomal protein S14