J3_7NFX_005

3D structure

PDB id

7NFX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GCGCAGUC*GUGC*GACGUC

Length

18 nucleotides

Bulged bases

7NFX|1|5|G|703

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NFX|1|5|G|448
7NFX|1|5|C|449
7NFX|1|5|G|450
7NFX|1|5|C|451
7NFX|1|5|A|452
7NFX|1|5|G|453
7NFX|1|5|U|454
7NFX|1|5|C|455
*
7NFX|1|5|G|701
7NFX|1|5|U|702
7NFX|1|5|G|703
7NFX|1|5|C|704
*
7NFX|1|5|G|1293
7NFX|1|5|A|1294
7NFX|1|5|C|1295
7NFX|1|5|G|1296
7NFX|1|5|U|1297
7NFX|1|5|C|1298

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain E

60S ribosomal protein L6

Chain e

eL32

Chain f

eL33