J3_7NFX_020

3D structure

PDB id

7NFX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CAU*GCUUCU*AAGG

Length

13 nucleotides

Bulged bases

7NFX|1|5|C|4990, 7NFX|1|5|A|5061

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NFX|1|5|C|4970
7NFX|1|5|A|4971
7NFX|1|5|U|4972
*
7NFX|1|5|G|4986
7NFX|1|5|C|4987
7NFX|1|5|U|4988
7NFX|1|5|U|4989
7NFX|1|5|C|4990
7NFX|1|5|U|4991
*
7NFX|1|5|A|5060
7NFX|1|5|A|5061
7NFX|1|5|G|5062
7NFX|1|5|G|5063

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain B

uL3

Chain P

uL22

Chain d

eL31

Chain z

Signal recognition particle subunit SRP72