J3_7NHK_010
3D structure
- PDB id
- 7NHK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUG*CUAACC*GAGACAG
- Length
- 16 nucleotides
- Bulged bases
- 7NHK|1|A|A|2211
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7NHK_010 not in the Motif Atlas
- Homologous match to J3_4WF9_007
- Geometric discrepancy: 0.1622
- The information below is about J3_4WF9_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_07703.1
- Basepair signature
- cWW-cWW-tSH-F-F-F-F-F-cWW-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
7NHK|1|A|U|2104
7NHK|1|A|U|2105
7NHK|1|A|G|2106
*
7NHK|1|A|C|2209
7NHK|1|A|U|2210
7NHK|1|A|A|2211
7NHK|1|A|A|2212
7NHK|1|A|C|2213
7NHK|1|A|C|2214
*
7NHK|1|A|G|2235
7NHK|1|A|A|2236
7NHK|1|A|G|2237
7NHK|1|A|A|2238
7NHK|1|A|C|2239
7NHK|1|A|A|2240
7NHK|1|A|G|2241
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain G
- 50S ribosomal protein L2
- Chain Z
- 50S ribosomal protein L28
Coloring options: