J3_7NHN_011

3D structure

PDB id

7NHN (explore in PDB, NAKB, or RNA 3D Hub)

Description

VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUC*GUC*GGGAACGGAAGU

Length

18 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NHN|1|A|A|1494
7NHN|1|A|U|1495
7NHN|1|A|C|1496
*
7NHN|1|A|G|1515
7NHN|1|A|U|1516
7NHN|1|A|C|1517
*
7NHN|1|A|G|1576
7NHN|1|A|G|1577
7NHN|1|A|G|1578
7NHN|1|A|A|1579
7NHN|1|A|A|1580
7NHN|1|A|C|1593
7NHN|1|A|G|1594
7NHN|1|A|G|1595
7NHN|1|A|A|1596
7NHN|1|A|A|1597
7NHN|1|A|G|1598
7NHN|1|A|U|1599

Current chains

Chain A

23S rRNA

Nearby chains