J3_7NHN_025

3D structure

PDB id

7NHN (explore in PDB, NAKB, or RNA 3D Hub)

Description

VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGACCAC*GCUUUC*GACA

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NHN|1|a|U|1013
7NHN|1|a|G|1014
7NHN|1|a|A|1015
7NHN|1|a|C|1016
7NHN|1|a|C|1017
7NHN|1|a|A|1018
7NHN|1|a|C|1019
*
7NHN|1|a|G|1032
7NHN|1|a|C|1033
7NHN|1|a|U|1034
7NHN|1|a|U|1035
7NHN|1|a|U|1036
7NHN|1|a|C|1037
*
7NHN|1|a|G|1046
7NHN|1|a|A|1047
7NHN|1|a|C|1048
7NHN|1|a|A|1049

Current chains

Chain a

16S rRNA

Nearby chains

Chain d

30S ribosomal protein S3

Chain o

30S ribosomal protein S14 type Z