J3_7NQH_005

3D structure

PDB id

7NQH (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UAUAAUC*GAUAGACCUUAC*GAAA

Length

23 nucleotides

Bulged bases

7NQH|1|AA|U|580, 7NQH|1|AA|A|581, 7NQH|1|AA|G|582, 7NQH|1|AA|A|583

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NQH|1|AA|U|561
7NQH|1|AA|A|562
7NQH|1|AA|U|563
7NQH|1|AA|A|564
7NQH|1|AA|A|565
7NQH|1|AA|U|566
7NQH|1|AA|C|567
*
7NQH|1|AA|G|578
7NQH|1|AA|A|579
7NQH|1|AA|U|580
7NQH|1|AA|A|581
7NQH|1|AA|G|582
7NQH|1|AA|A|583
7NQH|1|AA|C|584
7NQH|1|AA|C|585
7NQH|1|AA|U|586
7NQH|1|AA|U|587
7NQH|1|AA|A|588
7NQH|1|AA|C|589
*
7NQH|1|AA|G|706
7NQH|1|AA|A|707
7NQH|1|AA|A|708
7NQH|1|AA|A|709

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AJ

Mitochondrial ribosomal protein S10

Chain AN

Mitochondrial ribosomal protein S14

Chain BL

Peptide chain release factor 1-like, mitochondrial