3D structure

PDB id
7NQL (explore in PDB, NAKB, or RNA 3D Hub)
Description
55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
CUAG*CUAUAGAGAUAGUAC*GGAAAG
Length
25 nucleotides
Bulged bases
7NQL|1|BA|U|109
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7NQL|1|BA|C|8
7NQL|1|BA|U|9
7NQL|1|BA|A|10
7NQL|1|BA|G|11
*
7NQL|1|BA|C|106
7NQL|1|BA|U|107
7NQL|1|BA|A|108
7NQL|1|BA|U|109
7NQL|1|BA|A|110
7NQL|1|BA|G|111
7NQL|1|BA|A|112
7NQL|1|BA|G|113
7NQL|1|BA|A|114
7NQL|1|BA|U|115
7NQL|1|BA|A|116
7NQL|1|BA|G|117
7NQL|1|BA|U|118
7NQL|1|BA|A|119
7NQL|1|BA|C|120
*
7NQL|1|BA|G|127
7NQL|1|BA|G|128
7NQL|1|BA|A|129
7NQL|1|BA|A|130
7NQL|1|BA|A|131
7NQL|1|BA|G|132

Current chains

Chain BA
16S rRNA

Nearby chains

Chain B2
Mitochondrial ribosomal protein L47
Chain B7
Mitochondrial ribosomal protein L34
Chain BF
Mitochondrial ribosomal protein L4
Chain BU
Mitochondrial ribosomal protein L20
Chain BX
uL23m
Chain BY
uL24m
Chain Be
Mitochondrial ribosomal protein L41
Chain Bh
mL44
Chain Bi
Mitochondrial ribosomal protein L45
Chain Bn
Mitochondrial ribosomal protein L51

Coloring options:

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