J3_7NRC_040
3D structure
- PDB id
- 7NRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- AGAUAAAAAAUCAAUG*CUCUUUG*CAU
- Length
- 26 nucleotides
- Bulged bases
- 7NRC|1|S2|U|227, 7NRC|1|S2|U|238
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NRC|1|S2|A|213
7NRC|1|S2|G|214
7NRC|1|S2|A|215
7NRC|1|S2|U|216
7NRC|1|S2|A|217
7NRC|1|S2|A|218
7NRC|1|S2|A|219
7NRC|1|S2|A|220
7NRC|1|S2|A|221
7NRC|1|S2|A|222
7NRC|1|S2|U|223
7NRC|1|S2|C|224
7NRC|1|S2|A|225
7NRC|1|S2|A|226
7NRC|1|S2|U|227
7NRC|1|S2|G|228
*
7NRC|1|S2|C|237
7NRC|1|S2|U|238
7NRC|1|S2|C|239
7NRC|1|S2|U|240
7NRC|1|S2|U|241
7NRC|1|S2|U|242
7NRC|1|S2|G|243
*
7NRC|1|S2|C|250
7NRC|1|S2|A|251
7NRC|1|S2|U|252
Current chains
- Chain S2
- 18S rRNA (1771-MER)
Nearby chains
- Chain SS
- 40S ribosomal protein S4-A
- Chain ST
- 40S ribosomal protein S6-A
- Chain SX
- 40S ribosomal protein S11-A
Coloring options: