J3_7NSI_006

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

CUUG*CAG*CUUAUG

Length

13 nucleotides

Bulged bases

7NSI|1|AA|U|699

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7NSI_006 not in the Motif Atlas

Homologous match to J3_5J7L_007

Geometric discrepancy: 0.1866

The information below is about J3_5J7L_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_82572.1

Basepair signature

cWW-tSH-tWW-F-cWW-tHW-F-F-cWW

Number of instances in this motif group

2

Unit IDs

7NSI|1|AA|C|595
7NSI|1|AA|U|596
7NSI|1|AA|U|597
7NSI|1|AA|G|598
*
7NSI|1|AA|C|605
7NSI|1|AA|A|606
7NSI|1|AA|G|607
*
7NSI|1|AA|C|695
7NSI|1|AA|U|696
7NSI|1|AA|U|697
7NSI|1|AA|A|698
7NSI|1|AA|U|699
7NSI|1|AA|G|700

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AE

28S ribosomal protein S5, mitochondrial isoform X2

Chain AN

28S ribosomal protein S14, mitochondrial

Chain Ai

Mitochondrial ribosomal protein S33