J3_7NSI_016

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

CUAG*CUAUAGAGAUAGUAC*GGAAAG

Length

25 nucleotides

Bulged bases

7NSI|1|BA|U|109

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NSI|1|BA|C|8
7NSI|1|BA|U|9
7NSI|1|BA|A|10
7NSI|1|BA|G|11
*
7NSI|1|BA|C|106
7NSI|1|BA|U|107
7NSI|1|BA|A|108
7NSI|1|BA|U|109
7NSI|1|BA|A|110
7NSI|1|BA|G|111
7NSI|1|BA|A|112
7NSI|1|BA|G|113
7NSI|1|BA|A|114
7NSI|1|BA|U|115
7NSI|1|BA|A|116
7NSI|1|BA|G|117
7NSI|1|BA|U|118
7NSI|1|BA|A|119
7NSI|1|BA|C|120
*
7NSI|1|BA|G|127
7NSI|1|BA|G|128
7NSI|1|BA|A|129
7NSI|1|BA|A|130
7NSI|1|BA|A|131
7NSI|1|BA|G|132

Current chains

Chain BA

16S rRNA

Nearby chains

Chain B2

Mitochondrial ribosomal protein L47

Chain B7

39S ribosomal protein L34, mitochondrial

Chain BF

Mitochondrial ribosomal protein L4

Chain BU

39S ribosomal protein L20, mitochondrial isoform 1

Chain BX

39S ribosomal protein L23, mitochondrial

Chain BY

39S ribosomal protein L24, mitochondrial isoform X1

Chain Be

Mitochondrial ribosomal protein L41

Chain Bh

39S ribosomal protein L44, mitochondrial

Chain Bi

Mitochondrial ribosomal protein L45

Chain Bn

39S ribosomal protein L51, mitochondrial