J3_7NSO_003

3D structure

PDB id

7NSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGAUCUA*UGG*CAAA

Length

14 nucleotides

Bulged bases

7NSO|1|A|U|686, 7NSO|1|A|A|792

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7NSO_003 not in the Motif Atlas

Homologous match to J3_5J7L_038

Geometric discrepancy: 0.0604

The information below is about J3_5J7L_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_64189.2

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

7

Unit IDs

7NSO|1|A|U|683
7NSO|1|A|G|684
7NSO|1|A|A|685
7NSO|1|A|U|686
7NSO|1|A|C|687
7NSO|1|A|U|688
7NSO|1|A|A|689
*
7NSO|1|A|U|773
7NSO|1|A|G|774
7NSO|1|A|G|775
*
7NSO|1|A|C|791
7NSO|1|A|A|792
7NSO|1|A|A|793
7NSO|1|A|A|794

Current chains

Chain A

23S rRNA (2903-MER)

Nearby chains

Chain 2

50S ribosomal protein L34

Chain C

50S ribosomal protein L2