J3_7NSQ_030

3D structure

PDB id

7NSQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGAAG*CGCGAUACAG*CGUAC

Length

20 nucleotides

Bulged bases

7NSQ|1|A|U|321

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7NSQ_030 not in the Motif Atlas

Homologous match to J3_5J7L_068

Geometric discrepancy: 0.0707

The information below is about J3_5J7L_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46299.2

Basepair signature

cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7NSQ|1|A|G|297
7NSQ|1|A|G|298
7NSQ|1|A|A|299
7NSQ|1|A|A|300
7NSQ|1|A|G|301
*
7NSQ|1|A|C|316
7NSQ|1|A|G|317
7NSQ|1|A|C|318
7NSQ|1|A|G|319
7NSQ|1|A|A|320
7NSQ|1|A|U|321
7NSQ|1|A|A|322
7NSQ|1|A|C|323
7NSQ|1|A|A|324
7NSQ|1|A|G|325
*
7NSQ|1|A|C|337
7NSQ|1|A|G|338
7NSQ|1|A|U|339
7NSQ|1|A|A|340
7NSQ|1|A|C|341

Current chains

Chain A

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain U

50S ribosomal protein L24