J3_7NWH_002

3D structure

PDB id

7NWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GUUGAAAAG*CG*CAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWH|1|5|G|379
7NWH|1|5|U|380
7NWH|1|5|U|381
7NWH|1|5|G|382
7NWH|1|5|A|383
7NWH|1|5|A|384
7NWH|1|5|A|385
7NWH|1|5|A|386
7NWH|1|5|G|387
*
7NWH|1|5|C|414
7NWH|1|5|G|415
*
7NWH|1|8|C|19
7NWH|1|8|A|20
7NWH|1|8|C|21

Current chains

Chain 5

28S Ribosomal RNA

Chain 8

5.8S Ribosomal RNA

Nearby chains

Chain C

uL4

Chain Y

Ribosomal protein L26

Chain l

eL39