J3_7NWH_003

3D structure

PDB id

7NWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

UGAACUAU*AUAG*CGAA

Length

16 nucleotides

Bulged bases

7NWH|1|5|A|1534, 7NWH|1|5|G|1641

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWH|1|5|U|1531
7NWH|1|5|G|1532
7NWH|1|5|A|1533
7NWH|1|5|A|1534
7NWH|1|5|C|1535
7NWH|1|5|U|1536
7NWH|1|5|A|1537
7NWH|1|5|U|1538
*
7NWH|1|5|A|1621
7NWH|1|5|U|1622
7NWH|1|5|A|1623
7NWH|1|5|G|1624
*
7NWH|1|5|C|1640
7NWH|1|5|G|1641
7NWH|1|5|A|1642
7NWH|1|5|A|1643

Current chains

Chain 5

28S Ribosomal RNA

Nearby chains

Chain A

60S ribosomal protein L8

Chain N

Ribosomal protein L15

Chain j

Ribosomal protein L37

Chain l

eL39