J3_7NWH_005

3D structure

PDB id

7NWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GAUG*CGCUAAGG*CAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWH|1|5|G|1969
7NWH|1|5|A|1970
7NWH|1|5|U|1971
7NWH|1|5|G|1972
*
7NWH|1|5|C|1994
7NWH|1|5|G|1995
7NWH|1|5|C|1996
7NWH|1|5|U|1997
7NWH|1|5|A|1998
7NWH|1|5|A|1999
7NWH|1|5|G|2000
7NWH|1|5|G|2001
*
7NWH|1|5|C|2016
7NWH|1|5|A|2017
7NWH|1|5|C|2018

Current chains

Chain 5

28S Ribosomal RNA

Nearby chains

Chain s

60S acidic ribosomal protein P0

Chain t

uL12